Bannen was killed, aged 71, in a car accident by Loch Ness in November 1999. He and his wife, Marilyn Salisbury, who had been driving, were discovered in an overturned vehicle at Knockies Straight between Inverness and Fort Augustus. His wife, a Veterinarian for the Ministry of Agriculture, suffered only minor injuries. The couple had been married since 1976; they had no children.